Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 AL354751.1-201ENST00000412768 1863 ntBASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.75■□□□□ 0.59
PAAF1Q9BRP4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 AC064836.3-201ENST00000607928 673 ntBASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 PGM5P2-202ENST00000637225 1043 ntBASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PAAF1Q9BRP4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 MIR1233-2-201ENST00000408138 82 ntBASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 MIR1233-1-201ENST00000408722 82 ntBASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 AC023274.1-201ENST00000418278 595 ntBASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 AC005104.2-201ENST00000427818 678 ntBASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 AC055717.3-201ENST00000622967 595 ntBASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 AC012317.2-201ENST00000623305 2251 ntBASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 AC135050.7-201ENST00000624508 2218 ntBASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.73■□□□□ 0.59
PAAF1Q9BRP4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PAAF1Q9BRP4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
PAAF1Q9BRP4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PAAF1Q9BRP4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PAAF1Q9BRP4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PAAF1Q9BRP4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PAAF1Q9BRP4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PAAF1Q9BRP4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.72■□□□□ 0.59
PAAF1Q9BRP4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PAAF1Q9BRP4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms