Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE1Q99829 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CPNE1Q99829 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE1Q99829 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CPNE1Q99829 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CPNE1Q99829 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPNE1Q99829 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
CPNE1Q99829 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CPNE1Q99829 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CPNE1Q99829 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE1Q99829 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE1Q99829 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CPNE1Q99829 AC113347.1-201ENST00000413321 391 ntBASIC17.64■□□□□ 0.41
CPNE1Q99829 AC096633.1-201ENST00000422446 749 ntBASIC17.64■□□□□ 0.41
CPNE1Q99829 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE1Q99829 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CPNE1Q99829 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.64■□□□□ 0.41
CPNE1Q99829 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CPNE1Q99829 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CPNE1Q99829 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE1Q99829 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.64■□□□□ 0.41
CPNE1Q99829 AC139887.4-201ENST00000607877 719 ntBASIC17.64■□□□□ 0.41
CPNE1Q99829 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE1Q99829 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CPNE1Q99829 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE1Q99829 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CPNE1Q99829 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CPNE1Q99829 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE1Q99829 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE1Q99829 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE1Q99829 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE1Q99829 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 AC011676.5-201ENST00000624864 2660 ntBASIC17.63■□□□□ 0.41
CPNE1Q99829 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 AL137013.1-201ENST00000432946 1228 ntBASIC17.63■□□□□ 0.41
CPNE1Q99829 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.63■□□□□ 0.41
CPNE1Q99829 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE1Q99829 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE1Q99829 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE1Q99829 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CPNE1Q99829 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE1Q99829 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE1Q99829 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE1Q99829 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CPNE1Q99829 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE1Q99829 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CPNE1Q99829 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CPNE1Q99829 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE1Q99829 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE1Q99829 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE1Q99829 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CPNE1Q99829 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.62■□□□□ 0.41
CPNE1Q99829 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE1Q99829 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE1Q99829 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CPNE1Q99829 AC084018.2-201ENST00000613093 2607 ntBASIC17.62■□□□□ 0.41
CPNE1Q99829 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE1Q99829 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE1Q99829 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE1Q99829 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.62■□□□□ 0.41
CPNE1Q99829 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE1Q99829 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.62■□□□□ 0.41
CPNE1Q99829 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.62■□□□□ 0.41
CPNE1Q99829 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE1Q99829 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.62■□□□□ 0.41
CPNE1Q99829 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms