Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 Z92544.3-201ENST00000624747 417 ntBASIC18.22■□□□□ 0.51
CDCA3Q99618 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.22■□□□□ 0.51
CDCA3Q99618 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCA3Q99618 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCA3Q99618 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDCA3Q99618 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCA3Q99618 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.22■□□□□ 0.51
CDCA3Q99618 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCA3Q99618 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.22■□□□□ 0.51
CDCA3Q99618 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA3Q99618 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA3Q99618 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA3Q99618 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA3Q99618 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCA3Q99618 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA3Q99618 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA3Q99618 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDCA3Q99618 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCA3Q99618 AL671277.1-201ENST00000429656 993 ntBASIC18.21■□□□□ 0.51
CDCA3Q99618 SPDYE11-202ENST00000450699 704 ntBASIC18.21■□□□□ 0.51
CDCA3Q99618 RN7SL589P-201ENST00000481268 310 ntBASIC18.21■□□□□ 0.51
CDCA3Q99618 AC093520.2-201ENST00000561830 333 ntBASIC18.21■□□□□ 0.51
CDCA3Q99618 SPDYE9P-201ENST00000570642 692 ntBASIC18.21■□□□□ 0.51
CDCA3Q99618 SPDYE10P-202ENST00000612005 668 ntBASIC18.21■□□□□ 0.51
CDCA3Q99618 SPDYE8P-202ENST00000612377 668 ntBASIC18.21■□□□□ 0.51
CDCA3Q99618 AL645728.2-201ENST00000641974 660 ntBASIC18.21■□□□□ 0.51
CDCA3Q99618 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CDCA3Q99618 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDCA3Q99618 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.21■□□□□ 0.51
CDCA3Q99618 AC100803.2-201ENST00000562459 1963 ntBASIC18.21■□□□□ 0.5
CDCA3Q99618 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.2■□□□□ 0.5
CDCA3Q99618 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCA3Q99618 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CDCA3Q99618 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.2■□□□□ 0.5
CDCA3Q99618 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.2■□□□□ 0.5
CDCA3Q99618 AC005237.2-201ENST00000434368 219 ntBASIC18.2■□□□□ 0.5
CDCA3Q99618 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.2■□□□□ 0.5
CDCA3Q99618 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.2■□□□□ 0.5
CDCA3Q99618 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCA3Q99618 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CDCA3Q99618 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCA3Q99618 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCA3Q99618 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CDCA3Q99618 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCA3Q99618 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCA3Q99618 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.19■□□□□ 0.5
CDCA3Q99618 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
CDCA3Q99618 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA3Q99618 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCA3Q99618 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCA3Q99618 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA3Q99618 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA3Q99618 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA3Q99618 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA3Q99618 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCA3Q99618 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCA3Q99618 BASP1P1-201ENST00000430708 665 ntBASIC18.19■□□□□ 0.5
CDCA3Q99618 AC140658.5-201ENST00000438532 169 ntBASIC18.19■□□□□ 0.5
CDCA3Q99618 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDCA3Q99618 INGX-202ENST00000489074 768 ntBASIC18.19■□□□□ 0.5
CDCA3Q99618 AC093214.1-201ENST00000511688 1107 ntBASIC18.19■□□□□ 0.5
CDCA3Q99618 AL512356.2-201ENST00000546955 174 ntBASIC18.19■□□□□ 0.5
CDCA3Q99618 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.19■□□□□ 0.5
CDCA3Q99618 RNF165-205ENST00000588679 2904 ntBASIC18.19■□□□□ 0.5
CDCA3Q99618 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.19■□□□□ 0.5
CDCA3Q99618 AL390955.2-201ENST00000603032 514 ntBASIC18.19■□□□□ 0.5
CDCA3Q99618 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA3Q99618 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCA3Q99618 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA3Q99618 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CDCA3Q99618 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDCA3Q99618 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA3Q99618 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CDCA3Q99618 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA3Q99618 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA3Q99618 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
CDCA3Q99618 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
CDCA3Q99618 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
CDCA3Q99618 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDCA3Q99618 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
CDCA3Q99618 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms