Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 AL049757.1-201ENST00000616842 1596 ntBASIC20■□□□□ 0.79
SYNGAP1Q96PV0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 PMS2P2-201ENST00000425039 1128 ntBASIC20■□□□□ 0.79
SYNGAP1Q96PV0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20■□□□□ 0.79
SYNGAP1Q96PV0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 AL390961.4-201ENST00000623958 2535 ntBASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNGAP1Q96PV0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 AC132938.5-201ENST00000624980 1813 ntBASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 ELK2BP-201ENST00000415014 1224 ntBASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 MCCD1P2-201ENST00000423228 335 ntBASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 RPS8P6-201ENST00000426177 609 ntBASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 SIRPAP1-201ENST00000448467 1770 ntBASIC19.98■□□□□ 0.79
SYNGAP1Q96PV0 NCF1C-201ENST00000438382 1427 ntBASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.97■□□□□ 0.79
SYNGAP1Q96PV0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms