Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 AC009336.1-201ENST00000608941 1553 ntBASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 PHGDH-209ENST00000641074 1780 ntBASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 LINC00982-205ENST00000420957 435 ntBASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 AC067863.1-201ENST00000494933 530 ntBASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 AC112191.1-201ENST00000523689 701 ntBASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 AC190387.1-201ENST00000551683 408 ntBASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 BX276092.7-203ENST00000637198 1536 ntBASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NECTIN4Q96NY8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 MIR4745-201ENST00000577608 62 ntBASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 AC138761.1-201ENST00000584393 385 ntBASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 AC015911.4-201ENST00000588022 1070 ntBASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NECTIN4Q96NY8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 PI4KAP1-204ENST00000612579 1703 ntBASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NECTIN4Q96NY8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.14■□□□□ 0.5
NECTIN4Q96NY8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 MYCLP1-201ENST00000372451 1075 ntBASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 AC109322.1-201ENST00000524499 1264 ntBASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 AC005498.2-205ENST00000593218 784 ntBASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN4Q96NY8 AJ011932.1-201ENST00000621707 465 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms