Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF558Q96NG5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.64■□□□□ 0.58
ZNF558Q96NG5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 RHOQP3-201ENST00000437982 621 ntBASIC18.64■□□□□ 0.57
ZNF558Q96NG5 RFPL4AP1-201ENST00000530883 850 ntBASIC18.64■□□□□ 0.57
ZNF558Q96NG5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF558Q96NG5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 AP002472.1-201ENST00000577490 586 ntBASIC18.63■□□□□ 0.57
ZNF558Q96NG5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 AC007064.4-201ENST00000637740 555 ntBASIC18.63■□□□□ 0.57
ZNF558Q96NG5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 PI4KAP1-204ENST00000612579 1703 ntBASIC18.63■□□□□ 0.57
ZNF558Q96NG5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF558Q96NG5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 REXO1L9P-201ENST00000604264 2108 ntBASIC18.62■□□□□ 0.57
ZNF558Q96NG5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 AL020996.1-203ENST00000536896 2307 ntBASIC18.62■□□□□ 0.57
ZNF558Q96NG5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 FAM58CP-201ENST00000435741 640 ntBASIC18.62■□□□□ 0.57
ZNF558Q96NG5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 AC074386.1-202ENST00000463561 864 ntBASIC18.62■□□□□ 0.57
ZNF558Q96NG5 CYMP-203ENST00000474680 1263 ntBASIC18.62■□□□□ 0.57
ZNF558Q96NG5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 AL031432.2-201ENST00000566714 459 ntBASIC18.62■□□□□ 0.57
ZNF558Q96NG5 AL928711.1-201ENST00000570165 459 ntBASIC18.62■□□□□ 0.57
ZNF558Q96NG5 AC023141.13-201ENST00000604991 943 ntBASIC18.62■□□□□ 0.57
ZNF558Q96NG5 LINC02084-201ENST00000606069 1096 ntBASIC18.62■□□□□ 0.57
ZNF558Q96NG5 AC025580.3-201ENST00000617932 1424 ntBASIC18.62■□□□□ 0.57
ZNF558Q96NG5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF558Q96NG5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 ACTG1P4-201ENST00000425123 1122 ntBASIC18.61■□□□□ 0.57
ZNF558Q96NG5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms