Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.83■□□□□ 0.28
ITCHQ96J02 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.83■□□□□ 0.28
ITCHQ96J02 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.83■□□□□ 0.28
ITCHQ96J02 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.83■□□□□ 0.28
ITCHQ96J02 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.83■□□□□ 0.28
ITCHQ96J02 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.83■□□□□ 0.28
ITCHQ96J02 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.83■□□□□ 0.28
ITCHQ96J02 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.83■□□□□ 0.28
ITCHQ96J02 GCSHP2-201ENST00000560971 527 ntBASIC16.83■□□□□ 0.28
ITCHQ96J02 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ITCHQ96J02 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ITCHQ96J02 AC141257.4-201ENST00000634557 245 ntBASIC16.83■□□□□ 0.28
ITCHQ96J02 AC136944.6-201ENST00000634818 245 ntBASIC16.83■□□□□ 0.28
ITCHQ96J02 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITCHQ96J02 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITCHQ96J02 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ITCHQ96J02 CROCCP1-201ENST00000426910 5675 ntBASIC16.83■□□□□ 0.28
ITCHQ96J02 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ITCHQ96J02 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ITCHQ96J02 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
ITCHQ96J02 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ITCHQ96J02 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.82■□□□□ 0.28
ITCHQ96J02 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ITCHQ96J02 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.82■□□□□ 0.28
ITCHQ96J02 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ITCHQ96J02 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.82■□□□□ 0.28
ITCHQ96J02 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 LINC01568-207ENST00000641790 1380 ntBASIC16.82■□□□□ 0.28
ITCHQ96J02 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.82■□□□□ 0.28
ITCHQ96J02 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.82■□□□□ 0.28
ITCHQ96J02 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.82■□□□□ 0.28
ITCHQ96J02 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.82■□□□□ 0.28
ITCHQ96J02 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ITCHQ96J02 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.82■□□□□ 0.28
ITCHQ96J02 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.82■□□□□ 0.28
ITCHQ96J02 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ITCHQ96J02 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.82■□□□□ 0.28
ITCHQ96J02 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.82■□□□□ 0.28
ITCHQ96J02 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.82■□□□□ 0.28
ITCHQ96J02 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ITCHQ96J02 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITCHQ96J02 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ITCHQ96J02 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ITCHQ96J02 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.81■□□□□ 0.28
ITCHQ96J02 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 BX276092.7-203ENST00000637198 1536 ntBASIC16.81■□□□□ 0.28
ITCHQ96J02 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ITCHQ96J02 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.81■□□□□ 0.28
ITCHQ96J02 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ITCHQ96J02 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ITCHQ96J02 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ITCHQ96J02 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.81■□□□□ 0.28
ITCHQ96J02 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.81■□□□□ 0.28
ITCHQ96J02 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 AC009154.2-201ENST00000621177 724 ntBASIC16.81■□□□□ 0.28
ITCHQ96J02 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
ITCHQ96J02 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITCHQ96J02 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ITCHQ96J02 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ITCHQ96J02 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ITCHQ96J02 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.8■□□□□ 0.28
ITCHQ96J02 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.8■□□□□ 0.28
ITCHQ96J02 AC016396.2-201ENST00000562575 1417 ntBASIC16.8■□□□□ 0.28
ITCHQ96J02 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
ITCHQ96J02 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.8■□□□□ 0.28
ITCHQ96J02 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms