Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 IER3-202ENST00000376377 1350 ntBASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 AC233702.3-201ENST00000578656 1387 ntBASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 AC091607.1-201ENST00000490318 1060 ntBASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 AC087388.1-201ENST00000571370 1112 ntBASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 AP005901.3-202ENST00000581653 237 ntBASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 AC011467.2-201ENST00000598425 242 ntBASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PDLIM5Q96HC4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
PDLIM5Q96HC4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PDLIM5Q96HC4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PDLIM5Q96HC4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 AL353593.2-201ENST00000602529 1483 ntBASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 AP002383.4-201ENST00000442518 975 ntBASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 AP000550.4-202ENST00000639755 178 ntBASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 KRT18P1-202ENST00000452408 1331 ntBASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM5Q96HC4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 TPSP2-201ENST00000561760 610 ntBASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms