Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 TUBB3P1-201ENST00000405796 1332 ntBASIC20.49■□□□□ 0.87
CDCA5Q96FF9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.49■□□□□ 0.87
CDCA5Q96FF9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA5Q96FF9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 AC002558.1-201ENST00000488906 803 ntBASIC20.48■□□□□ 0.87
CDCA5Q96FF9 AC079140.1-201ENST00000508039 487 ntBASIC20.48■□□□□ 0.87
CDCA5Q96FF9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.48■□□□□ 0.87
CDCA5Q96FF9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA5Q96FF9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.47■□□□□ 0.87
CDCA5Q96FF9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 KLF2P3-201ENST00000451977 1087 ntBASIC20.47■□□□□ 0.87
CDCA5Q96FF9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDCA5Q96FF9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 AC116562.4-201ENST00000641316 2276 ntBASIC20.46■□□□□ 0.87
CDCA5Q96FF9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 GAPDHP21-201ENST00000450301 1010 ntBASIC20.46■□□□□ 0.87
CDCA5Q96FF9 SLC25A6P2-201ENST00000497974 877 ntBASIC20.46■□□□□ 0.87
CDCA5Q96FF9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 AP001059.3-201ENST00000619053 235 ntBASIC20.46■□□□□ 0.87
CDCA5Q96FF9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDCA5Q96FF9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA5Q96FF9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CDCA5Q96FF9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA5Q96FF9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA5Q96FF9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA5Q96FF9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA5Q96FF9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDCA5Q96FF9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
CDCA5Q96FF9 AL096828.2-201ENST00000567259 1965 ntBASIC20.45■□□□□ 0.86
CDCA5Q96FF9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms