Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX11Q96FC9 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 AL353801.3-201ENST00000609898 542 ntBASIC20.97■□□□□ 0.95
DDX11Q96FC9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX11Q96FC9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
DDX11Q96FC9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX11Q96FC9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.96■□□□□ 0.95
DDX11Q96FC9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 NSUN5P1-202ENST00000421140 1535 ntBASIC20.96■□□□□ 0.95
DDX11Q96FC9 NSUN5P2-203ENST00000457352 1529 ntBASIC20.96■□□□□ 0.95
DDX11Q96FC9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
DDX11Q96FC9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.96■□□□□ 0.95
DDX11Q96FC9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX11Q96FC9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.96■□□□□ 0.95
DDX11Q96FC9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
DDX11Q96FC9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX11Q96FC9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX11Q96FC9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
DDX11Q96FC9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
DDX11Q96FC9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
DDX11Q96FC9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.95■□□□□ 0.95
DDX11Q96FC9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX11Q96FC9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX11Q96FC9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDX11Q96FC9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 PP12613-201ENST00000424958 2230 ntBASIC20.95■□□□□ 0.94
DDX11Q96FC9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDX11Q96FC9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDX11Q96FC9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX11Q96FC9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX11Q96FC9 MINOS1P3-201ENST00000457048 203 ntBASIC20.95■□□□□ 0.94
DDX11Q96FC9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDX11Q96FC9 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 AC008687.5-201ENST00000593746 558 ntBASIC20.95■□□□□ 0.94
DDX11Q96FC9 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.95■□□□□ 0.94
DDX11Q96FC9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 AC004263.2-201ENST00000617183 678 ntBASIC20.95■□□□□ 0.94
DDX11Q96FC9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX11Q96FC9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDX11Q96FC9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX11Q96FC9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX11Q96FC9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX11Q96FC9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX11Q96FC9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.94■□□□□ 0.94
DDX11Q96FC9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX11Q96FC9 KRT16P4-201ENST00000453883 522 ntBASIC20.94■□□□□ 0.94
DDX11Q96FC9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.94■□□□□ 0.94
DDX11Q96FC9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.94■□□□□ 0.94
DDX11Q96FC9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
DDX11Q96FC9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
DDX11Q96FC9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX11Q96FC9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX11Q96FC9 AL355312.1-201ENST00000407115 2176 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms