Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.23■□□□□ 0.03
USP9XQ93008 TREML5P-201ENST00000421694 576 ntBASIC15.23■□□□□ 0.03
USP9XQ93008 AC140658.5-201ENST00000438532 169 ntBASIC15.23■□□□□ 0.03
USP9XQ93008 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.23■□□□□ 0.03
USP9XQ93008 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
USP9XQ93008 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP9XQ93008 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.23■□□□□ 0.03
USP9XQ93008 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USP9XQ93008 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
USP9XQ93008 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
USP9XQ93008 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP9XQ93008 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
USP9XQ93008 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.22■□□□□ 0.03
USP9XQ93008 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.22■□□□□ 0.03
USP9XQ93008 AL671277.1-201ENST00000429656 993 ntBASIC15.22■□□□□ 0.03
USP9XQ93008 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.22■□□□□ 0.03
USP9XQ93008 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.22■□□□□ 0.03
USP9XQ93008 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.22■□□□□ 0.03
USP9XQ93008 AC026150.2-201ENST00000564693 1156 ntBASIC15.22■□□□□ 0.03
USP9XQ93008 MIR4525-201ENST00000580000 75 ntBASIC15.22■□□□□ 0.03
USP9XQ93008 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.22■□□□□ 0.03
USP9XQ93008 AC009118.2-201ENST00000613275 655 ntBASIC15.22■□□□□ 0.03
USP9XQ93008 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP9XQ93008 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP9XQ93008 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.22■□□□□ 0.03
USP9XQ93008 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP9XQ93008 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP9XQ93008 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
USP9XQ93008 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP9XQ93008 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.22■□□□□ 0.03
USP9XQ93008 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP9XQ93008 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
USP9XQ93008 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.22■□□□□ 0.03
USP9XQ93008 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP9XQ93008 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.22■□□□□ 0.03
USP9XQ93008 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.22■□□□□ 0.03
USP9XQ93008 RN7SL589P-201ENST00000481268 310 ntBASIC15.22■□□□□ 0.03
USP9XQ93008 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
USP9XQ93008 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.22■□□□□ 0.03
USP9XQ93008 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.22■□□□□ 0.03
USP9XQ93008 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
USP9XQ93008 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
USP9XQ93008 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP9XQ93008 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.21■□□□□ 0.03
USP9XQ93008 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
USP9XQ93008 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.21■□□□□ 0.03
USP9XQ93008 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.21■□□□□ 0.03
USP9XQ93008 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
USP9XQ93008 COX5BP2-201ENST00000392354 334 ntBASIC15.21■□□□□ 0.03
USP9XQ93008 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.21■□□□□ 0.03
USP9XQ93008 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.21■□□□□ 0.03
USP9XQ93008 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.21■□□□□ 0.03
USP9XQ93008 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
USP9XQ93008 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.21■□□□□ 0.03
USP9XQ93008 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
USP9XQ93008 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
USP9XQ93008 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.21■□□□□ 0.03
USP9XQ93008 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP9XQ93008 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
USP9XQ93008 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.21■□□□□ 0.02
USP9XQ93008 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
USP9XQ93008 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
USP9XQ93008 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
USP9XQ93008 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
USP9XQ93008 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
USP9XQ93008 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.21■□□□□ 0.02
USP9XQ93008 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.21■□□□□ 0.02
USP9XQ93008 STK25P1-201ENST00000585406 838 ntBASIC15.21■□□□□ 0.02
USP9XQ93008 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
USP9XQ93008 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
USP9XQ93008 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
USP9XQ93008 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
USP9XQ93008 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
USP9XQ93008 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.2■□□□□ 0.02
USP9XQ93008 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
USP9XQ93008 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.2■□□□□ 0.02
USP9XQ93008 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
USP9XQ93008 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
USP9XQ93008 HAUS4P1-201ENST00000406739 1145 ntBASIC15.2■□□□□ 0.02
USP9XQ93008 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.2■□□□□ 0.02
USP9XQ93008 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
USP9XQ93008 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.2■□□□□ 0.02
USP9XQ93008 MIR6727-201ENST00000620702 65 ntBASIC15.2■□□□□ 0.02
USP9XQ93008 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.2■□□□□ 0.02
USP9XQ93008 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
USP9XQ93008 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
USP9XQ93008 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
USP9XQ93008 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms