Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HPS1Q92902 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.2■□□□□ 0.18
HPS1Q92902 KRT18P57-201ENST00000443599 1254 ntBASIC16.2■□□□□ 0.18
HPS1Q92902 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 FAM207BP-201ENST00000447172 505 ntBASIC16.2■□□□□ 0.18
HPS1Q92902 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.2■□□□□ 0.18
HPS1Q92902 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.2■□□□□ 0.18
HPS1Q92902 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HPS1Q92902 NFIC-211ENST00000641145 8399 ntBASIC16.2■□□□□ 0.18
HPS1Q92902 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HPS1Q92902 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.2■□□□□ 0.18
HPS1Q92902 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HPS1Q92902 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.19■□□□□ 0.18
HPS1Q92902 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.19■□□□□ 0.18
HPS1Q92902 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.19■□□□□ 0.18
HPS1Q92902 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.19■□□□□ 0.18
HPS1Q92902 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
HPS1Q92902 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.19■□□□□ 0.18
HPS1Q92902 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.19■□□□□ 0.18
HPS1Q92902 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.19■□□□□ 0.18
HPS1Q92902 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.19■□□□□ 0.18
HPS1Q92902 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
HPS1Q92902 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.19■□□□□ 0.18
HPS1Q92902 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HPS1Q92902 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HPS1Q92902 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.19■□□□□ 0.18
HPS1Q92902 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HPS1Q92902 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HPS1Q92902 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS1Q92902 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS1Q92902 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
HPS1Q92902 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.18■□□□□ 0.18
HPS1Q92902 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.18■□□□□ 0.18
HPS1Q92902 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.18■□□□□ 0.18
HPS1Q92902 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HPS1Q92902 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
HPS1Q92902 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HPS1Q92902 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HPS1Q92902 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS1Q92902 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.18■□□□□ 0.18
HPS1Q92902 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.18■□□□□ 0.18
HPS1Q92902 PRSS44-201ENST00000515154 1146 ntBASIC16.18■□□□□ 0.18
HPS1Q92902 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS1Q92902 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS1Q92902 SLC25A1P4-201ENST00000567977 778 ntBASIC16.18■□□□□ 0.18
HPS1Q92902 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HPS1Q92902 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS1Q92902 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS1Q92902 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
HPS1Q92902 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.18■□□□□ 0.18
HPS1Q92902 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.18■□□□□ 0.18
HPS1Q92902 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HPS1Q92902 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.18■□□□□ 0.18
HPS1Q92902 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.18■□□□□ 0.18
HPS1Q92902 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HPS1Q92902 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms