Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 EMBP1-201ENST00000458200 901 ntBASIC18.76■□□□□ 0.59
DDX1Q92499 AC002558.1-201ENST00000488906 803 ntBASIC18.76■□□□□ 0.59
DDX1Q92499 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.76■□□□□ 0.59
DDX1Q92499 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.76■□□□□ 0.59
DDX1Q92499 AC091304.2-201ENST00000564639 760 ntBASIC18.76■□□□□ 0.59
DDX1Q92499 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
DDX1Q92499 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX1Q92499 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.76■□□□□ 0.59
DDX1Q92499 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.76■□□□□ 0.59
DDX1Q92499 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
DDX1Q92499 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DDX1Q92499 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX1Q92499 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.76■□□□□ 0.59
DDX1Q92499 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX1Q92499 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.75■□□□□ 0.59
DDX1Q92499 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.75■□□□□ 0.59
DDX1Q92499 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.75■□□□□ 0.59
DDX1Q92499 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DDX1Q92499 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
DDX1Q92499 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.75■□□□□ 0.59
DDX1Q92499 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 TSPY19P-201ENST00000418461 509 ntBASIC18.75■□□□□ 0.59
DDX1Q92499 PMS2P1-201ENST00000431037 1228 ntBASIC18.75■□□□□ 0.59
DDX1Q92499 TSPY18P-201ENST00000441642 509 ntBASIC18.75■□□□□ 0.59
DDX1Q92499 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.75■□□□□ 0.59
DDX1Q92499 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.75■□□□□ 0.59
DDX1Q92499 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
DDX1Q92499 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.75■□□□□ 0.59
DDX1Q92499 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
DDX1Q92499 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
DDX1Q92499 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.75■□□□□ 0.59
DDX1Q92499 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DDX1Q92499 AC080080.1-201ENST00000625121 2420 ntBASIC18.75■□□□□ 0.59
DDX1Q92499 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.75■□□□□ 0.59
DDX1Q92499 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
DDX1Q92499 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX1Q92499 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX1Q92499 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX1Q92499 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.74■□□□□ 0.59
DDX1Q92499 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX1Q92499 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX1Q92499 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
DDX1Q92499 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX1Q92499 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
DDX1Q92499 AP001094.4-201ENST00000579008 2176 ntBASIC18.74■□□□□ 0.59
DDX1Q92499 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX1Q92499 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX1Q92499 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX1Q92499 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX1Q92499 DRAXINP1-201ENST00000437611 948 ntBASIC18.74■□□□□ 0.59
DDX1Q92499 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX1Q92499 TPSP2-201ENST00000561760 610 ntBASIC18.74■□□□□ 0.59
DDX1Q92499 MIR3180-1-201ENST00000580374 94 ntBASIC18.74■□□□□ 0.59
DDX1Q92499 MIR3180-3-201ENST00000584616 94 ntBASIC18.74■□□□□ 0.59
DDX1Q92499 AL139327.4-201ENST00000612362 153 ntBASIC18.74■□□□□ 0.59
DDX1Q92499 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.74■□□□□ 0.59
DDX1Q92499 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX1Q92499 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
DDX1Q92499 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX1Q92499 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX1Q92499 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.74■□□□□ 0.59
DDX1Q92499 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.74■□□□□ 0.59
DDX1Q92499 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
DDX1Q92499 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX1Q92499 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX1Q92499 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX1Q92499 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
DDX1Q92499 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.73■□□□□ 0.59
DDX1Q92499 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX1Q92499 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX1Q92499 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX1Q92499 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX1Q92499 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX1Q92499 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.73■□□□□ 0.59
DDX1Q92499 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX1Q92499 AL049757.1-201ENST00000616842 1596 ntBASIC18.73■□□□□ 0.59
DDX1Q92499 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX1Q92499 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.73■□□□□ 0.59
DDX1Q92499 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
DDX1Q92499 AC233702.3-201ENST00000578656 1387 ntBASIC18.73■□□□□ 0.59
DDX1Q92499 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX1Q92499 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms