Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 PRKXP1-201ENST00000561423 1122 ntBASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 CXCL1P1-201ENST00000502804 216 ntBASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 RN7SL736P-201ENST00000613111 269 ntBASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 AL691432.2-201ENST00000607222 2038 ntBASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SYNE2Q8WXH0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 SIRPAP1-201ENST00000448467 1770 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 PI4KAP1-204ENST00000612579 1703 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 MIR326-201ENST00000362220 95 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 BCRP2-202ENST00000447763 634 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 ATP6V0CP2-201ENST00000469409 207 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 BCRP6-201ENST00000510112 632 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 BCRP7-201ENST00000511549 544 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 ACTL9-202ENST00000612068 1252 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 AC106794.1-201ENST00000506935 792 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 UFM1-202ENST00000379649 846 ntTSL 4 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 BX284668.4-201ENST00000453917 508 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 RPL13AP20-201ENST00000459725 609 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 KRT18P34-201ENST00000488218 1270 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 RN7SL560P-201ENST00000577943 264 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 PFN2-202ENST00000423691 911 ntTSL 2 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 GRAMD4P3-201ENST00000621665 1669 ntBASIC7.03□□□□□ -1.28
SYNE2Q8WXH0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms