Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 CXCL1P1-201ENST00000502804 216 ntBASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 PI4KAP1-204ENST00000612579 1703 ntBASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 AC107918.2-201ENST00000530817 355 ntBASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 AC027796.2-201ENST00000575326 344 ntBASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 AC091812.2-201ENST00000619081 385 ntBASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CASKIN1Q8WXD9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 AC025580.3-201ENST00000617932 1424 ntBASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 STOM-202ENST00000347359 870 ntTSL 2 BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 AC068137.2-201ENST00000605408 478 ntBASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 AL355385.1-201ENST00000606123 409 ntBASIC27.15■■□□□ 1.94
CASKIN1Q8WXD9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC27.14■■□□□ 1.94
CASKIN1Q8WXD9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC27.14■■□□□ 1.94
CASKIN1Q8WXD9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CASKIN1Q8WXD9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CASKIN1Q8WXD9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CASKIN1Q8WXD9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CASKIN1Q8WXD9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CASKIN1Q8WXD9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CASKIN1Q8WXD9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CASKIN1Q8WXD9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CASKIN1Q8WXD9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CASKIN1Q8WXD9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CASKIN1Q8WXD9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CASKIN1Q8WXD9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CASKIN1Q8WXD9 METTL21AP1-201ENST00000438852 635 ntBASIC27.14■■□□□ 1.93
CASKIN1Q8WXD9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CASKIN1Q8WXD9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.93
CASKIN1Q8WXD9 AL596442.2-201ENST00000610240 980 ntBASIC27.14■■□□□ 1.93
CASKIN1Q8WXD9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC27.14■■□□□ 1.93
CASKIN1Q8WXD9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CASKIN1Q8WXD9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC27.14■■□□□ 1.93
CASKIN1Q8WXD9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 CD82-202ENST00000342935 967 ntTSL 5 BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 AC023141.13-201ENST00000604991 943 ntBASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 AC092902.6-201ENST00000641783 218 ntBASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CASKIN1Q8WXD9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC27.12■■□□□ 1.93
CASKIN1Q8WXD9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms