Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 AL139327.4-201ENST00000612362 153 ntBASIC20.74■□□□□ 0.91
STAG1Q8WVM7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
STAG1Q8WVM7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.73■□□□□ 0.91
STAG1Q8WVM7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 KLF4P1-201ENST00000412782 1185 ntBASIC20.73■□□□□ 0.91
STAG1Q8WVM7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 FAM197Y8-203ENST00000450145 560 ntBASIC20.73■□□□□ 0.91
STAG1Q8WVM7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 AL139288.1-201ENST00000623748 933 ntBASIC20.73■□□□□ 0.91
STAG1Q8WVM7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
STAG1Q8WVM7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 AL356309.3-201ENST00000624132 1934 ntBASIC20.72■□□□□ 0.91
STAG1Q8WVM7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 AC009336.1-201ENST00000608941 1553 ntBASIC20.72■□□□□ 0.91
STAG1Q8WVM7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 AC148477.5-201ENST00000625164 1645 ntBASIC20.72■□□□□ 0.91
STAG1Q8WVM7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 STK19B-204ENST00000512515 211 ntBASIC20.72■□□□□ 0.91
STAG1Q8WVM7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 SART3-203ENST00000546611 1184 ntBASIC20.72■□□□□ 0.91
STAG1Q8WVM7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 AC064862.7-201ENST00000604520 867 ntBASIC20.72■□□□□ 0.91
STAG1Q8WVM7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
STAG1Q8WVM7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms