Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSH3Q8TE77 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSH3Q8TE77 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.72■■□□□ 1.07
SSH3Q8TE77 AC046185.3-201ENST00000623228 1824 ntBASIC21.71■■□□□ 1.07
SSH3Q8TE77 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SSH3Q8TE77 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.71■■□□□ 1.07
SSH3Q8TE77 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SSH3Q8TE77 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSH3Q8TE77 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSH3Q8TE77 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SSH3Q8TE77 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.71■■□□□ 1.07
SSH3Q8TE77 AC079781.3-201ENST00000449110 356 ntBASIC21.71■■□□□ 1.07
SSH3Q8TE77 PRYP5-201ENST00000451909 266 ntBASIC21.71■■□□□ 1.07
SSH3Q8TE77 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.71■■□□□ 1.07
SSH3Q8TE77 SART3-203ENST00000546611 1184 ntBASIC21.71■■□□□ 1.07
SSH3Q8TE77 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.71■■□□□ 1.07
SSH3Q8TE77 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSH3Q8TE77 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SSH3Q8TE77 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SSH3Q8TE77 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSH3Q8TE77 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSH3Q8TE77 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.07
SSH3Q8TE77 AL356309.3-201ENST00000624132 1934 ntBASIC21.7■■□□□ 1.07
SSH3Q8TE77 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SSH3Q8TE77 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 AC004817.3-201ENST00000602957 2129 ntBASIC21.7■■□□□ 1.06
SSH3Q8TE77 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 AL121912.1-201ENST00000603683 238 ntBASIC21.7■■□□□ 1.06
SSH3Q8TE77 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 AL139288.1-201ENST00000623748 933 ntBASIC21.7■■□□□ 1.06
SSH3Q8TE77 TP73-AS1-207ENST00000624167 988 ntBASIC21.7■■□□□ 1.06
SSH3Q8TE77 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.7■■□□□ 1.06
SSH3Q8TE77 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSH3Q8TE77 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SSH3Q8TE77 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 FAAHP1-202ENST00000446499 1238 ntBASIC21.69■■□□□ 1.06
SSH3Q8TE77 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.69■■□□□ 1.06
SSH3Q8TE77 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.69■■□□□ 1.06
SSH3Q8TE77 AL031008.1-201ENST00000619963 541 ntBASIC21.69■■□□□ 1.06
SSH3Q8TE77 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.69■■□□□ 1.06
SSH3Q8TE77 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.69■■□□□ 1.06
SSH3Q8TE77 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.69■■□□□ 1.06
SSH3Q8TE77 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSH3Q8TE77 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
SSH3Q8TE77 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SSH3Q8TE77 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.69■■□□□ 1.06
SSH3Q8TE77 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
SSH3Q8TE77 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SSH3Q8TE77 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSH3Q8TE77 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSH3Q8TE77 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.68■■□□□ 1.06
SSH3Q8TE77 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.68■■□□□ 1.06
SSH3Q8TE77 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.68■■□□□ 1.06
SSH3Q8TE77 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSH3Q8TE77 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.68■■□□□ 1.06
SSH3Q8TE77 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms