Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 AC112698.1-201ENST00000510299 916 ntBASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RPS4Y2Q8TD47 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 AP000523.1-201ENST00000398242 1049 ntBASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 AC010947.1-201ENST00000623454 693 ntBASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.43■□□□□ 0.06
RPS4Y2Q8TD47 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 PCDHA14-201ENST00000506751 2298 ntBASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 CYP2D8P-201ENST00000433633 1490 ntBASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 HMGA1P5-201ENST00000412453 271 ntBASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 ECEL1P3-201ENST00000427961 737 ntBASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 AC005915.1-201ENST00000624912 2018 ntBASIC15.42■□□□□ 0.06
RPS4Y2Q8TD47 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms