Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LINC01006Q8NI28 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.65□□□□□ -0.22
LINC01006Q8NI28 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 KRT19P2-202ENST00000557173 1012 ntBASIC13.65□□□□□ -0.22
LINC01006Q8NI28 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 AP000974.1-201ENST00000623909 2387 ntBASIC13.65□□□□□ -0.22
LINC01006Q8NI28 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01006Q8NI28 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 REXO1L9P-201ENST00000604264 2108 ntBASIC13.64□□□□□ -0.23
LINC01006Q8NI28 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 RHOQP3-201ENST00000437982 621 ntBASIC13.64□□□□□ -0.23
LINC01006Q8NI28 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 RFPL4AP1-201ENST00000530883 850 ntBASIC13.64□□□□□ -0.23
LINC01006Q8NI28 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 OR7E47P-204ENST00000575924 449 ntBASIC13.64□□□□□ -0.23
LINC01006Q8NI28 AP002472.1-201ENST00000577490 586 ntBASIC13.64□□□□□ -0.23
LINC01006Q8NI28 LINC02084-201ENST00000606069 1096 ntBASIC13.64□□□□□ -0.23
LINC01006Q8NI28 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 AL020996.1-203ENST00000536896 2307 ntBASIC13.64□□□□□ -0.23
LINC01006Q8NI28 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 PI4KAP1-204ENST00000612579 1703 ntBASIC13.64□□□□□ -0.23
LINC01006Q8NI28 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 AC025580.3-201ENST00000617932 1424 ntBASIC13.64□□□□□ -0.23
LINC01006Q8NI28 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms