Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 TSSC2-201ENST00000450217 709 ntBASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 GUSBP12-201ENST00000513727 720 ntBASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 AP005901.3-202ENST00000581653 237 ntBASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 AL121672.3-201ENST00000608644 468 ntBASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 GNAS-203ENST00000306120 1878 ntBASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 AL513477.1-201ENST00000602865 2407 ntBASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIMC1Q8NDZ2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
SIMC1Q8NDZ2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.64■□□□□ 0.26
SIMC1Q8NDZ2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SIMC1Q8NDZ2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
SIMC1Q8NDZ2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 PP12613-201ENST00000424958 2230 ntBASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 CHCHD2P8-201ENST00000429873 447 ntBASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 AC005336.2-201ENST00000593183 939 ntBASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SIMC1Q8NDZ2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 REXO1L11P-201ENST00000620964 1927 ntBASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 UPK3BP1-201ENST00000428678 509 ntBASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 MIR3180-1-201ENST00000580374 94 ntBASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 AC090616.6-201ENST00000582640 721 ntBASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 MIR3180-3-201ENST00000584616 94 ntBASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 NPAP1P7-201ENST00000613027 823 ntBASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms