Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 AL020996.1-203ENST00000536896 2307 ntBASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC27.35■■□□□ 1.97
CFAP43Q8NDM7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 AC007274.1-201ENST00000439805 662 ntBASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CFAP43Q8NDM7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 ACTG1P4-201ENST00000425123 1122 ntBASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 AC005034.1-201ENST00000426657 489 ntBASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 TK1-204ENST00000590430 683 ntTSL 3 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 AC004835.2-201ENST00000603762 682 ntBASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 BCAR1-209ENST00000546196 1340 ntBASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 FAM86GP-201ENST00000448322 971 ntBASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 STK19B-204ENST00000512515 211 ntBASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFAP43Q8NDM7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
CFAP43Q8NDM7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
CFAP43Q8NDM7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.96
CFAP43Q8NDM7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 AC004408.2-201ENST00000623613 2777 ntBASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 AC004449.1-201ENST00000564240 433 ntBASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFAP43Q8NDM7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CFAP43Q8NDM7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CFAP43Q8NDM7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms