Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.14■□□□□ 0.5
PAF1Q8N7H5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PAF1Q8N7H5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PAF1Q8N7H5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PAF1Q8N7H5 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PAF1Q8N7H5 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PAF1Q8N7H5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PAF1Q8N7H5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 MTCL1P1-201ENST00000446207 792 ntBASIC18.14■□□□□ 0.49
PAF1Q8N7H5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 AC074051.2-201ENST00000565115 352 ntBASIC18.14■□□□□ 0.49
PAF1Q8N7H5 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.14■□□□□ 0.49
PAF1Q8N7H5 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 MIR600HG-201ENST00000449175 5984 ntBASIC18.13■□□□□ 0.49
PAF1Q8N7H5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 AC132938.6-201ENST00000623828 1655 ntBASIC18.13■□□□□ 0.49
PAF1Q8N7H5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 AP002383.4-201ENST00000442518 975 ntBASIC18.13■□□□□ 0.49
PAF1Q8N7H5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PAF1Q8N7H5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PAF1Q8N7H5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms