Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 PHGDH-209ENST00000641074 1780 ntBASIC20■□□□□ 0.79
CCDC155Q8N6L0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
CCDC155Q8N6L0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC155Q8N6L0 PMS2P7-201ENST00000506558 1336 ntBASIC20■□□□□ 0.79
CCDC155Q8N6L0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20■□□□□ 0.79
CCDC155Q8N6L0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 AL096828.2-201ENST00000567259 1965 ntBASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC155Q8N6L0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 MIR1233-2-201ENST00000408138 82 ntBASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 MIR1233-1-201ENST00000408722 82 ntBASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 RPL13AP23-201ENST00000480739 586 ntBASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 FAM215A-202ENST00000632077 792 ntBASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC155Q8N6L0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 POLD2P1-201ENST00000511220 997 ntBASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC155Q8N6L0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms