Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 AL121672.3-201ENST00000608644 468 ntBASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 AL353801.3-201ENST00000609898 542 ntBASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 REXO1L11P-201ENST00000620964 1927 ntBASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 AC106820.2-201ENST00000563775 3264 ntBASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 BX276092.5-203ENST00000456199 560 ntBASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 AC087388.1-201ENST00000571370 1112 ntBASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 AC011840.4-201ENST00000578471 627 ntBASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 AL592071.1-201ENST00000611956 408 ntBASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TTC9CQ8N5M4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TTC9CQ8N5M4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.96□□□□□ -0.18
TTC9CQ8N5M4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TTC9CQ8N5M4 AL138688.1-201ENST00000624851 1594 ntBASIC13.96□□□□□ -0.18
TTC9CQ8N5M4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.96□□□□□ -0.18
TTC9CQ8N5M4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TTC9CQ8N5M4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TTC9CQ8N5M4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.95□□□□□ -0.18
TTC9CQ8N5M4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms