Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.39■□□□□ 0.69
NME8Q8N427 AC092865.5-201ENST00000545435 363 ntBASIC19.39■□□□□ 0.69
NME8Q8N427 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.39■□□□□ 0.69
NME8Q8N427 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.39■□□□□ 0.69
NME8Q8N427 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
NME8Q8N427 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.39■□□□□ 0.69
NME8Q8N427 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.39■□□□□ 0.69
NME8Q8N427 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.39■□□□□ 0.69
NME8Q8N427 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.39■□□□□ 0.69
NME8Q8N427 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.39■□□□□ 0.69
NME8Q8N427 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.39■□□□□ 0.69
NME8Q8N427 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NME8Q8N427 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.39■□□□□ 0.69
NME8Q8N427 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.39■□□□□ 0.69
NME8Q8N427 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NME8Q8N427 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NME8Q8N427 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.38■□□□□ 0.69
NME8Q8N427 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NME8Q8N427 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.38■□□□□ 0.69
NME8Q8N427 BX842568.4-201ENST00000421222 227 ntBASIC19.38■□□□□ 0.69
NME8Q8N427 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.38■□□□□ 0.69
NME8Q8N427 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 KRT18P3-201ENST00000451602 1288 ntBASIC19.38■□□□□ 0.69
NME8Q8N427 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.38■□□□□ 0.69
NME8Q8N427 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 AC136632.2-201ENST00000512891 861 ntBASIC19.38■□□□□ 0.69
NME8Q8N427 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.38■□□□□ 0.69
NME8Q8N427 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
NME8Q8N427 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.38■□□□□ 0.69
NME8Q8N427 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.38■□□□□ 0.69
NME8Q8N427 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.38■□□□□ 0.69
NME8Q8N427 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.38■□□□□ 0.69
NME8Q8N427 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.38■□□□□ 0.69
NME8Q8N427 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 AC019129.2-201ENST00000609837 1235 ntBASIC19.38■□□□□ 0.69
NME8Q8N427 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.38■□□□□ 0.69
NME8Q8N427 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.38■□□□□ 0.69
NME8Q8N427 AC004706.3-202ENST00000621574 984 ntBASIC19.38■□□□□ 0.69
NME8Q8N427 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.38■□□□□ 0.69
NME8Q8N427 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NME8Q8N427 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NME8Q8N427 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
NME8Q8N427 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.37■□□□□ 0.69
NME8Q8N427 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.37■□□□□ 0.69
NME8Q8N427 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
NME8Q8N427 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.37■□□□□ 0.69
NME8Q8N427 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NME8Q8N427 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NME8Q8N427 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
NME8Q8N427 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.37■□□□□ 0.69
NME8Q8N427 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.37■□□□□ 0.69
NME8Q8N427 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.37■□□□□ 0.69
NME8Q8N427 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NME8Q8N427 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.37■□□□□ 0.69
NME8Q8N427 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.37■□□□□ 0.69
NME8Q8N427 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.37■□□□□ 0.69
NME8Q8N427 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.37■□□□□ 0.69
NME8Q8N427 AC009947.1-201ENST00000444350 727 ntBASIC19.37■□□□□ 0.69
NME8Q8N427 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.37■□□□□ 0.69
NME8Q8N427 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.37■□□□□ 0.69
NME8Q8N427 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.37■□□□□ 0.69
NME8Q8N427 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NME8Q8N427 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NME8Q8N427 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.37■□□□□ 0.69
NME8Q8N427 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NME8Q8N427 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms