Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNPS1P1-201ENST00000507437 918 ntBASIC16.39■□□□□ 0.21
BEST3Q8N1M1 DUTP2-201ENST00000519164 463 ntBASIC16.39■□□□□ 0.21
BEST3Q8N1M1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.39■□□□□ 0.21
BEST3Q8N1M1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 AC097374.2-201ENST00000618617 1306 ntBASIC16.39■□□□□ 0.21
BEST3Q8N1M1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.39■□□□□ 0.21
BEST3Q8N1M1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 AC018712.1-201ENST00000455767 687 ntBASIC16.38■□□□□ 0.21
BEST3Q8N1M1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST3Q8N1M1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 AC093677.2-201ENST00000600169 1863 ntBASIC16.37■□□□□ 0.21
BEST3Q8N1M1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 AC096633.1-201ENST00000422446 749 ntBASIC16.37■□□□□ 0.21
BEST3Q8N1M1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 BX640515.1-201ENST00000617215 977 ntBASIC16.37■□□□□ 0.21
BEST3Q8N1M1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 AC010460.3-201ENST00000511359 1579 ntBASIC16.37■□□□□ 0.21
BEST3Q8N1M1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 AC135776.1-201ENST00000319817 2481 ntBASIC16.37■□□□□ 0.21
BEST3Q8N1M1 NOC2LP2-201ENST00000407594 1944 ntBASIC16.37■□□□□ 0.21
BEST3Q8N1M1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST3Q8N1M1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms