Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 AC009533.2-201ENST00000543664 586 ntBASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC65Q8IXS2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC65Q8IXS2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 TOB2P1-201ENST00000469761 992 ntBASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 AC002558.1-201ENST00000488906 803 ntBASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 AP005901.3-202ENST00000581653 237 ntBASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CCDC65Q8IXS2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 FAM220CP-201ENST00000395253 831 ntBASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 LINC00265-3P-201ENST00000447588 903 ntBASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 AC122714.2-201ENST00000502787 707 ntBASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC65Q8IXS2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms