Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 KRT18P31-201ENST00000506277 1292 ntBASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 AL591684.3-201ENST00000605187 298 ntBASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 AL732292.2-201ENST00000609649 430 ntBASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 AL049757.1-201ENST00000616842 1596 ntBASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.55■□□□□ 0.56
SCUBE3Q8IX30 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 AC103564.2-201ENST00000432853 1299 ntBASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 AC091304.2-201ENST00000564639 760 ntBASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 AL121772.3-201ENST00000610840 674 ntBASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 LINC01451-201ENST00000623792 534 ntBASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 AC133963.1-201ENST00000504166 1679 ntBASIC18.54■□□□□ 0.56
SCUBE3Q8IX30 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 AC109462.3-201ENST00000573934 613 ntBASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 GPALPP1-207ENST00000611650 899 ntBASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SCUBE3Q8IX30 HLA-J-201ENST00000462773 1622 ntBASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 KRT8P10-201ENST00000450021 1447 ntBASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms