Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 BCRP1-201ENST00000444246 691 ntBASIC19.03■□□□□ 0.64
HERC6Q8IVU3 ACTG1P14-201ENST00000446382 1122 ntBASIC19.03■□□□□ 0.64
HERC6Q8IVU3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 KRT19P2-202ENST00000557173 1012 ntBASIC19.03■□□□□ 0.64
HERC6Q8IVU3 AL096865.1-201ENST00000606796 927 ntBASIC19.03■□□□□ 0.64
HERC6Q8IVU3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.03■□□□□ 0.64
HERC6Q8IVU3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 FAM58CP-201ENST00000435741 640 ntBASIC19.02■□□□□ 0.64
HERC6Q8IVU3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 AL805961.1-202ENST00000641562 540 ntBASIC19.02■□□□□ 0.64
HERC6Q8IVU3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.02■□□□□ 0.64
HERC6Q8IVU3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HERC6Q8IVU3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
HERC6Q8IVU3 AL049757.1-201ENST00000616842 1596 ntBASIC19.02■□□□□ 0.63
HERC6Q8IVU3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 AC244107.1-201ENST00000442033 332 ntBASIC19.01■□□□□ 0.63
HERC6Q8IVU3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 SIGLEC30P-201ENST00000455569 941 ntBASIC19.01■□□□□ 0.63
HERC6Q8IVU3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HERC6Q8IVU3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19■□□□□ 0.63
HERC6Q8IVU3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19■□□□□ 0.63
HERC6Q8IVU3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19■□□□□ 0.63
HERC6Q8IVU3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19■□□□□ 0.63
HERC6Q8IVU3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19■□□□□ 0.63
HERC6Q8IVU3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms