Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 MTCL1P1-201ENST00000446207 792 ntBASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 AC083849.1-201ENST00000615227 514 ntBASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00346Q8IVM7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 RCN1P1-201ENST00000400413 996 ntBASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 SPDYE13P-201ENST00000445314 798 ntBASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 AC063952.2-201ENST00000498792 1227 ntBASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 AC022616.7-201ENST00000525383 220 ntBASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 AL390719.2-201ENST00000606993 987 ntBASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 LINC01451-201ENST00000623792 534 ntBASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00346Q8IVM7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 AC068472.1-201ENST00000474589 881 ntBASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms