Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.52■□□□□ 0.07
LYSMD2Q8IV50 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 AC100803.2-201ENST00000562459 1963 ntBASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 UNC93B4-201ENST00000505679 747 ntBASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 RARRES2P6-201ENST00000567333 442 ntBASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 AC083880.1-201ENST00000608266 535 ntBASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 AC099343.3-201ENST00000605834 2503 ntBASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 GPAT2P1-201ENST00000444924 1672 ntBASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
LYSMD2Q8IV50 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 SLC29A4P1-201ENST00000398760 971 ntBASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LYSMD2Q8IV50 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms