Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CROCCP2-202ENST00000412962 2773 ntBASIC18.38■□□□□ 0.53
RFX6Q8HWS3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RFX6Q8HWS3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.37■□□□□ 0.53
RFX6Q8HWS3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 SIRPAP1-201ENST00000448467 1770 ntBASIC18.37■□□□□ 0.53
RFX6Q8HWS3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
RFX6Q8HWS3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 AL645929.1-201ENST00000420084 975 ntBASIC18.36■□□□□ 0.53
RFX6Q8HWS3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFX6Q8HWS3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.35■□□□□ 0.53
RFX6Q8HWS3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RFX6Q8HWS3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms