Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.33■□□□□ 0.2
VRK2Q86Y07 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VRK2Q86Y07 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VRK2Q86Y07 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.33■□□□□ 0.2
VRK2Q86Y07 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK2Q86Y07 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.33■□□□□ 0.2
VRK2Q86Y07 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.33■□□□□ 0.2
VRK2Q86Y07 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK2Q86Y07 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VRK2Q86Y07 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VRK2Q86Y07 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VRK2Q86Y07 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK2Q86Y07 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK2Q86Y07 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK2Q86Y07 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK2Q86Y07 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VRK2Q86Y07 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK2Q86Y07 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK2Q86Y07 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.33■□□□□ 0.2
VRK2Q86Y07 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
VRK2Q86Y07 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
VRK2Q86Y07 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VRK2Q86Y07 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.33■□□□□ 0.2
VRK2Q86Y07 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VRK2Q86Y07 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VRK2Q86Y07 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 PRORSD1P-202ENST00000563365 2154 ntBASIC16.31■□□□□ 0.2
VRK2Q86Y07 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 AL645929.1-201ENST00000420084 975 ntBASIC16.31■□□□□ 0.2
VRK2Q86Y07 TMPOP1-202ENST00000424642 1267 ntBASIC16.31■□□□□ 0.2
VRK2Q86Y07 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VRK2Q86Y07 LYSMD4-203ENST00000378904 2122 ntBASIC16.31■□□□□ 0.2
VRK2Q86Y07 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
VRK2Q86Y07 AC022211.2-201ENST00000585075 2527 ntBASIC16.3■□□□□ 0.2
VRK2Q86Y07 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms