Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 GK-202ENST00000378941 458 ntTSL 3 BASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 SPDYE21P-201ENST00000413323 827 ntBASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 IGHV3-65-201ENST00000523210 341 ntBASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 Z92544.3-201ENST00000624747 417 ntBASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
OTOP1Q7RTM1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
OTOP1Q7RTM1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
OTOP1Q7RTM1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
OTOP1Q7RTM1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
OTOP1Q7RTM1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
OTOP1Q7RTM1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 BICD1-207ENST00000551848 1962 ntBASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 IGLL3P-201ENST00000412472 434 ntBASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 FAM58CP-201ENST00000435741 640 ntBASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 AC025678.2-201ENST00000562061 970 ntBASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 AC004790.2-201ENST00000623588 572 ntBASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 AL513210.1-201ENST00000629608 234 ntBASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OTOP1Q7RTM1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 AC008667.4-201ENST00000607370 168 ntBASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 AD001527.2-201ENST00000622994 785 ntBASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 AC004877.2-201ENST00000623941 599 ntBASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
OTOP1Q7RTM1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.3■□□□□ 0.84
OTOP1Q7RTM1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms