Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF111Q6ZNA4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 AL163051.1-201ENST00000569214 1512 ntBASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 AC008741.2-201ENST00000612792 3115 ntBASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 RASA4DP-201ENST00000460726 1199 ntBASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 HTR7P1-202ENST00000624664 4411 ntBASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RNF111Q6ZNA4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 AL157888.1-201ENST00000631930 593 ntBASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 PCDHA1-201ENST00000378133 2726 ntBASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF111Q6ZNA4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RNF111Q6ZNA4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RNF111Q6ZNA4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.14■□□□□ 0.34
RNF111Q6ZNA4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RNF111Q6ZNA4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 MIR149-201ENST00000384879 89 ntBASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 FAM8A6P-201ENST00000407496 1135 ntBASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 SPDYE15P-201ENST00000424157 909 ntBASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF111Q6ZNA4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms