Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3CPQ6ZMV5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3CPQ6ZMV5 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 RNU6-584P-201ENST00000410350 95 ntBASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 AC114973.1-201ENST00000429057 632 ntBASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 VN1R108P-201ENST00000431580 830 ntBASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 HNRNPA3P12-201ENST00000437410 1063 ntBASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 KATNBL1P3-201ENST00000443475 909 ntBASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 AC069540.1-201ENST00000446320 988 ntBASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 AC012150.1-201ENST00000553075 593 ntTSL 4 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 AC009075.2-201ENST00000568483 301 ntBASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 Metazoa_SRP.62-201ENST00000619972 268 ntBASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 RPL23AP49-202ENST00000638439 1138 ntTSL 5 BASIC20.58■□□□□ 0.89
PPP4R3CPQ6ZMV5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.58■□□□□ 0.88
PPP4R3CPQ6ZMV5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3CPQ6ZMV5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
PPP4R3CPQ6ZMV5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3CPQ6ZMV5 AC009113.1-201ENST00000570267 2443 ntBASIC20.58■□□□□ 0.88
PPP4R3CPQ6ZMV5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3CPQ6ZMV5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP4R3CPQ6ZMV5 AL357033.4-201ENST00000617703 1807 ntBASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 SPATA22-201ENST00000268981 1280 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 RNASE4-201ENST00000397995 853 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 AC112777.1-201ENST00000540175 1423 ntBASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 BNIP3P31-201ENST00000604515 566 ntBASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 Metazoa_SRP.79-201ENST00000610676 290 ntBASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP4R3CPQ6ZMV5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 LINC00958-201ENST00000504230 1558 ntTSL 2 BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 USP12PY-201ENST00000427677 1064 ntBASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 MTND1P27-201ENST00000451117 902 ntBASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 ANKRD26P4-201ENST00000455755 950 ntBASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 RNU5A-4P-201ENST00000516588 111 ntBASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 CSNK1A1P1-202ENST00000563423 981 ntBASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPP4R3CPQ6ZMV5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms