Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 AC134043.2-201ENST00000624206 2238 ntBASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 AC011467.2-201ENST00000598425 242 ntBASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFWD3Q6PCD5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RFWD3Q6PCD5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RFWD3Q6PCD5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.54
RFWD3Q6PCD5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RFWD3Q6PCD5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RFWD3Q6PCD5 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.39■□□□□ 0.54
RFWD3Q6PCD5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 AC007967.3-201ENST00000434308 558 ntBASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 AC079781.3-201ENST00000449110 356 ntBASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 AC132008.2-207ENST00000454517 770 ntBASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 INTS4P1-201ENST00000438455 1935 ntBASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.39■□□□□ 0.53
RFWD3Q6PCD5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 AC010460.3-201ENST00000511359 1579 ntBASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 AL031008.1-201ENST00000619963 541 ntBASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 REXO1L6P-202ENST00000619970 1078 ntBASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD3Q6PCD5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms