Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC27A1Q6PCB7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.05■□□□□ 0.64
SLC27A1Q6PCB7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.05■□□□□ 0.64
SLC27A1Q6PCB7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC27A1Q6PCB7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC27A1Q6PCB7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 RNA5SP415-201ENST00000517246 115 ntBASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.04■□□□□ 0.64
SLC27A1Q6PCB7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 SLC25A6P5-201ENST00000435663 894 ntBASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 AC136632.2-201ENST00000512891 861 ntBASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 Z83851.2-201ENST00000609564 659 ntBASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 PGM5P2-202ENST00000637225 1043 ntBASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC27A1Q6PCB7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 UNC93B6-202ENST00000528242 690 ntBASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 AC005593.1-201ENST00000624894 515 ntBASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC27A1Q6PCB7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC27A1Q6PCB7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLC27A1Q6PCB7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLC27A1Q6PCB7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.02■□□□□ 0.63
SLC27A1Q6PCB7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC27A1Q6PCB7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC27A1Q6PCB7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SLC27A1Q6PCB7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC27A1Q6PCB7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC27A1Q6PCB7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SLC27A1Q6PCB7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC27A1Q6PCB7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC27A1Q6PCB7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SLC27A1Q6PCB7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC27A1Q6PCB7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC27A1Q6PCB7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms