Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TERF1P1-201ENST00000311003 1181 ntBASIC18.02■□□□□ 0.48
CASC4Q6P4E1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 STARP1-201ENST00000397973 869 ntBASIC18.02■□□□□ 0.48
CASC4Q6P4E1 CROCCP2-202ENST00000412962 2773 ntBASIC18.02■□□□□ 0.48
CASC4Q6P4E1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 AL138688.1-201ENST00000624851 1594 ntBASIC18.02■□□□□ 0.48
CASC4Q6P4E1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.02■□□□□ 0.48
CASC4Q6P4E1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CASC4Q6P4E1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CASC4Q6P4E1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CASC4Q6P4E1 KRT8P47-201ENST00000604727 1398 ntBASIC18.02■□□□□ 0.47
CASC4Q6P4E1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CASC4Q6P4E1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CASC4Q6P4E1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CASC4Q6P4E1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CASC4Q6P4E1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CASC4Q6P4E1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CASC4Q6P4E1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CASC4Q6P4E1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
CASC4Q6P4E1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CASC4Q6P4E1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.01■□□□□ 0.47
CASC4Q6P4E1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 AC092597.1-201ENST00000487352 616 ntBASIC18.01■□□□□ 0.47
CASC4Q6P4E1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 ZNF444P1-201ENST00000559497 298 ntBASIC18.01■□□□□ 0.47
CASC4Q6P4E1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASC4Q6P4E1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
CASC4Q6P4E1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18■□□□□ 0.47
CASC4Q6P4E1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18■□□□□ 0.47
CASC4Q6P4E1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18■□□□□ 0.47
CASC4Q6P4E1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18■□□□□ 0.47
CASC4Q6P4E1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18■□□□□ 0.47
CASC4Q6P4E1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CASC4Q6P4E1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18■□□□□ 0.47
CASC4Q6P4E1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CASC4Q6P4E1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18■□□□□ 0.47
CASC4Q6P4E1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18■□□□□ 0.47
CASC4Q6P4E1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
CASC4Q6P4E1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 HLA-F-220ENST00000434407 884 ntBASIC18■□□□□ 0.47
CASC4Q6P4E1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18■□□□□ 0.47
CASC4Q6P4E1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18■□□□□ 0.47
CASC4Q6P4E1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CASC4Q6P4E1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18■□□□□ 0.47
CASC4Q6P4E1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CASC4Q6P4E1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CASC4Q6P4E1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18■□□□□ 0.47
CASC4Q6P4E1 AC009154.2-201ENST00000621177 724 ntBASIC18■□□□□ 0.47
CASC4Q6P4E1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CASC4Q6P4E1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18■□□□□ 0.47
CASC4Q6P4E1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms