Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 CROCCP1-201ENST00000426910 5675 ntBASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 AC009065.1-201ENST00000564055 1225 ntBASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 NEK4P2-201ENST00000580004 1012 ntBASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TMEM53Q6P2H8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 HOXB1-202ENST00000577092 1414 ntBASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 AC141257.4-201ENST00000634557 245 ntBASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 AC136944.6-201ENST00000634818 245 ntBASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms