Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 AP001094.4-201ENST00000579008 2176 ntBASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 TOB2P1-201ENST00000469761 992 ntBASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 AL049757.1-201ENST00000616842 1596 ntBASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRAMEF9Q5VWM5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 IGHV3-47-201ENST00000425060 335 ntBASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 AL139327.4-201ENST00000612362 153 ntBASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF9Q5VWM5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRAMEF9Q5VWM5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRAMEF9Q5VWM5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.96■□□□□ 0.3
PRAMEF9Q5VWM5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.96■□□□□ 0.3
PRAMEF9Q5VWM5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRAMEF9Q5VWM5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.96■□□□□ 0.3
PRAMEF9Q5VWM5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRAMEF9Q5VWM5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PRAMEF9Q5VWM5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 AC002558.1-201ENST00000488906 803 ntBASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 AC122714.2-201ENST00000502787 707 ntBASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 AC109462.3-201ENST00000573934 613 ntBASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 BNIP3P18-201ENST00000593976 575 ntBASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF9Q5VWM5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
PRAMEF9Q5VWM5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms