Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 LINC00304-203ENST00000565008 1864 ntBASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42BPAQ5VT25 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.82
CDC42BPAQ5VT25 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC26.39■■□□□ 1.82
CDC42BPAQ5VT25 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC26.39■■□□□ 1.82
CDC42BPAQ5VT25 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CDC42BPAQ5VT25 TIMM8BP1-201ENST00000452384 211 ntBASIC26.39■■□□□ 1.82
CDC42BPAQ5VT25 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC26.39■■□□□ 1.82
CDC42BPAQ5VT25 AC015911.4-201ENST00000588022 1070 ntBASIC26.39■■□□□ 1.82
CDC42BPAQ5VT25 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC26.39■■□□□ 1.82
CDC42BPAQ5VT25 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC26.39■■□□□ 1.82
CDC42BPAQ5VT25 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CDC42BPAQ5VT25 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CDC42BPAQ5VT25 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 CCDC74BP1-201ENST00000508880 1123 ntBASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 AC129492.6-201ENST00000611383 1305 ntBASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 LINC00628-201ENST00000628516 1289 ntBASIC26.39■■□□□ 1.81
CDC42BPAQ5VT25 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 GPS2P2-201ENST00000430745 888 ntBASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 SPDYE11-202ENST00000450699 704 ntBASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 SPDYE9P-201ENST00000570642 692 ntBASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 SPDYE10P-202ENST00000612005 668 ntBASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 SPDYE8P-202ENST00000612377 668 ntBASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 AJ011932.1-201ENST00000621707 465 ntBASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC26.38■■□□□ 1.81
CDC42BPAQ5VT25 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 REXO1L3P-201ENST00000622202 1288 ntBASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 HNRNPRP1-201ENST00000453465 1695 ntBASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
CDC42BPAQ5VT25 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 COX20P2-201ENST00000452636 358 ntBASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 GREM1-201ENST00000560677 623 ntTSL 4 BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42BPAQ5VT25 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms