Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AC007967.3-201ENST00000434308 558 ntBASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 AC011467.2-201ENST00000598425 242 ntBASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDLRAP1Q5SW96 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 AC008764.6-201ENST00000595909 2069 ntBASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 COX5BP2-201ENST00000392354 334 ntBASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 FAM220CP-201ENST00000395253 831 ntBASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 CLEC4GP1-201ENST00000596555 870 ntBASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 AL121772.3-201ENST00000610840 674 ntBASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 AC114341.1-201ENST00000618070 349 ntBASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 AC010460.3-201ENST00000511359 1579 ntBASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDLRAP1Q5SW96 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 KRT16P4-201ENST00000453883 522 ntBASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 FOSL1P1-201ENST00000511041 816 ntBASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 AC138894.3-201ENST00000603787 634 ntBASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.56■□□□□ 0.4
LDLRAP1Q5SW96 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LDLRAP1Q5SW96 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LDLRAP1Q5SW96 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LDLRAP1Q5SW96 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms