Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 AC009336.1-201ENST00000608941 1553 ntBASIC18.63■□□□□ 0.57
VARS2Q5ST30 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARS2Q5ST30 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
VARS2Q5ST30 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
VARS2Q5ST30 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.62■□□□□ 0.57
VARS2Q5ST30 AC020763.4-201ENST00000623414 4170 ntBASIC18.62■□□□□ 0.57
VARS2Q5ST30 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VARS2Q5ST30 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
VARS2Q5ST30 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.62■□□□□ 0.57
VARS2Q5ST30 AC007967.2-201ENST00000432613 625 ntBASIC18.62■□□□□ 0.57
VARS2Q5ST30 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.62■□□□□ 0.57
VARS2Q5ST30 AC108751.1-201ENST00000490852 363 ntBASIC18.62■□□□□ 0.57
VARS2Q5ST30 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.62■□□□□ 0.57
VARS2Q5ST30 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.62■□□□□ 0.57
VARS2Q5ST30 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.62■□□□□ 0.57
VARS2Q5ST30 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VARS2Q5ST30 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARS2Q5ST30 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 ABALON-201ENST00000629058 1903 ntBASIC18.61■□□□□ 0.57
VARS2Q5ST30 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.61■□□□□ 0.57
VARS2Q5ST30 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.61■□□□□ 0.57
VARS2Q5ST30 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.61■□□□□ 0.57
VARS2Q5ST30 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
VARS2Q5ST30 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.61■□□□□ 0.57
VARS2Q5ST30 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.61■□□□□ 0.57
VARS2Q5ST30 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.61■□□□□ 0.57
VARS2Q5ST30 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VARS2Q5ST30 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.61■□□□□ 0.57
VARS2Q5ST30 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.61■□□□□ 0.57
VARS2Q5ST30 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARS2Q5ST30 BICD1-207ENST00000551848 1962 ntBASIC18.61■□□□□ 0.57
VARS2Q5ST30 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VARS2Q5ST30 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
VARS2Q5ST30 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.6■□□□□ 0.57
VARS2Q5ST30 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VARS2Q5ST30 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VARS2Q5ST30 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.6■□□□□ 0.57
VARS2Q5ST30 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VARS2Q5ST30 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VARS2Q5ST30 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VARS2Q5ST30 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
VARS2Q5ST30 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.6■□□□□ 0.57
VARS2Q5ST30 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VARS2Q5ST30 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VARS2Q5ST30 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VARS2Q5ST30 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
VARS2Q5ST30 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms