Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 RBM17P3-201ENST00000417687 1192 ntBASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 SCARNA2-201ENST00000458748 420 ntBASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 BX640515.1-201ENST00000617215 977 ntBASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 AF228730.7-201ENST00000641842 219 ntBASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 WIZP1-201ENST00000531444 2299 ntBASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
SNAP47Q5SQN1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 ABCD1P5-201ENST00000445663 754 ntBASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 RNA5SP419-201ENST00000515908 135 ntBASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 AL049840.3-201ENST00000602669 611 ntBASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNAP47Q5SQN1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 AP005117.1-201ENST00000584346 1413 ntBASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms