Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.07■□□□□ 0.8
LONRF3Q496Y0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
LONRF3Q496Y0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LONRF3Q496Y0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LONRF3Q496Y0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LONRF3Q496Y0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.07■□□□□ 0.8
LONRF3Q496Y0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LONRF3Q496Y0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LONRF3Q496Y0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.07■□□□□ 0.8
LONRF3Q496Y0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LONRF3Q496Y0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LONRF3Q496Y0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.07■□□□□ 0.8
LONRF3Q496Y0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 AC009053.2-201ENST00000563701 2365 ntBASIC20.06■□□□□ 0.8
LONRF3Q496Y0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 TPM4P1-201ENST00000436100 807 ntBASIC20.06■□□□□ 0.8
LONRF3Q496Y0 LINC00265-3P-201ENST00000447588 903 ntBASIC20.06■□□□□ 0.8
LONRF3Q496Y0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 AP000867.3-201ENST00000524675 377 ntBASIC20.06■□□□□ 0.8
LONRF3Q496Y0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 AC116407.2-201ENST00000613639 860 ntBASIC20.06■□□□□ 0.8
LONRF3Q496Y0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LONRF3Q496Y0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 PRORSD1P-202ENST00000563365 2154 ntBASIC20.05■□□□□ 0.8
LONRF3Q496Y0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.05■□□□□ 0.8
LONRF3Q496Y0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 AC022211.2-201ENST00000585075 2527 ntBASIC20.05■□□□□ 0.8
LONRF3Q496Y0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LONRF3Q496Y0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 AC026396.1-201ENST00000419388 421 ntBASIC20.04■□□□□ 0.8
LONRF3Q496Y0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.04■□□□□ 0.8
LONRF3Q496Y0 AC009154.2-201ENST00000621177 724 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms