Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 AL096828.2-201ENST00000567259 1965 ntBASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 EMBP1-201ENST00000458200 901 ntBASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 KRT18P41-201ENST00000518924 1277 ntBASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 KRT8P26-201ENST00000534154 1276 ntBASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 AL031008.1-201ENST00000619963 541 ntBASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 CHCHD2P8-201ENST00000429873 447 ntBASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 AC079776.4-201ENST00000511039 504 ntBASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHRFAM7AQ494W8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 KRT18P1-202ENST00000452408 1331 ntBASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 AP002383.4-201ENST00000442518 975 ntBASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 AL662844.1-201ENST00000546340 181 ntBASIC15.46■□□□□ 0.07
CHRFAM7AQ494W8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms