Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 BNIP3P18-201ENST00000593976 575 ntBASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 AC091076.1-201ENST00000610741 619 ntBASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 AC022211.2-201ENST00000585075 2527 ntBASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 AC116353.5-201ENST00000638148 1699 ntBASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO1Q2MKA7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 NSUN5P1-202ENST00000421140 1535 ntBASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 NSUN5P2-203ENST00000457352 1529 ntBASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 SLC25A1P3-201ENST00000395415 828 ntBASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 ATP5G2P1-201ENST00000433580 426 ntBASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 AL353593.2-201ENST00000602529 1483 ntBASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO1Q2MKA7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 INTS4P1-201ENST00000438455 1935 ntBASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 PCDHA12-202ENST00000613593 2588 ntBASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 RCN1P2-201ENST00000398357 915 ntBASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 LINC00265-3P-201ENST00000447588 903 ntBASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 VENTXP7-201ENST00000475503 772 ntBASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.23■□□□□ 0.03
RSPO1Q2MKA7 Z69720.1-201ENST00000601483 472 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms