Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLRN1P58418 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.78■□□□□ 0.12
CLRN1P58418 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.78■□□□□ 0.12
CLRN1P58418 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.78■□□□□ 0.12
CLRN1P58418 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.78■□□□□ 0.12
CLRN1P58418 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CLRN1P58418 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.78■□□□□ 0.12
CLRN1P58418 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.78■□□□□ 0.12
CLRN1P58418 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.78■□□□□ 0.12
CLRN1P58418 BX276092.5-203ENST00000456199 560 ntBASIC15.78■□□□□ 0.12
CLRN1P58418 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.78■□□□□ 0.12
CLRN1P58418 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLRN1P58418 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.78■□□□□ 0.12
CLRN1P58418 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.78■□□□□ 0.12
CLRN1P58418 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.78■□□□□ 0.12
CLRN1P58418 AL592071.1-201ENST00000611956 408 ntBASIC15.78■□□□□ 0.12
CLRN1P58418 LINC01451-201ENST00000623792 534 ntBASIC15.78■□□□□ 0.12
CLRN1P58418 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.78■□□□□ 0.12
CLRN1P58418 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.78■□□□□ 0.12
CLRN1P58418 HLA-J-201ENST00000462773 1622 ntBASIC15.78■□□□□ 0.12
CLRN1P58418 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLRN1P58418 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLRN1P58418 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.78■□□□□ 0.12
CLRN1P58418 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.78■□□□□ 0.12
CLRN1P58418 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.78■□□□□ 0.12
CLRN1P58418 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.78■□□□□ 0.12
CLRN1P58418 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.78■□□□□ 0.12
CLRN1P58418 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLRN1P58418 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLRN1P58418 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLRN1P58418 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLRN1P58418 AC005332.1-201ENST00000577698 1310 ntBASIC15.77■□□□□ 0.12
CLRN1P58418 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLRN1P58418 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLRN1P58418 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CLRN1P58418 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLRN1P58418 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLRN1P58418 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.77■□□□□ 0.12
CLRN1P58418 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.77■□□□□ 0.12
CLRN1P58418 AC011840.4-201ENST00000578471 627 ntBASIC15.77■□□□□ 0.12
CLRN1P58418 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
CLRN1P58418 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.77■□□□□ 0.12
CLRN1P58418 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.77■□□□□ 0.12
CLRN1P58418 AL121672.3-201ENST00000608644 468 ntBASIC15.77■□□□□ 0.12
CLRN1P58418 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLRN1P58418 LINC00304-203ENST00000565008 1864 ntBASIC15.77■□□□□ 0.11
CLRN1P58418 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLRN1P58418 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLRN1P58418 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CLRN1P58418 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.77■□□□□ 0.11
CLRN1P58418 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLRN1P58418 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLRN1P58418 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLRN1P58418 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLRN1P58418 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLRN1P58418 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.77■□□□□ 0.11
CLRN1P58418 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLRN1P58418 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLRN1P58418 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLRN1P58418 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLRN1P58418 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.77■□□□□ 0.11
CLRN1P58418 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.76■□□□□ 0.11
CLRN1P58418 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.76■□□□□ 0.11
CLRN1P58418 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.76■□□□□ 0.11
CLRN1P58418 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLRN1P58418 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLRN1P58418 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.76■□□□□ 0.11
CLRN1P58418 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms