Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN20P56880 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN20P56880 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 MTCL1P1-201ENST00000446207 792 ntBASIC16.19■□□□□ 0.18
CLDN20P56880 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN20P56880 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN20P56880 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.19■□□□□ 0.18
CLDN20P56880 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLDN20P56880 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN20P56880 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN20P56880 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN20P56880 AC018695.7-201ENST00000624587 2492 ntBASIC16.19■□□□□ 0.18
CLDN20P56880 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN20P56880 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLDN20P56880 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CLDN20P56880 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN20P56880 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN20P56880 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN20P56880 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN20P56880 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN20P56880 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLDN20P56880 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CLDN20P56880 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN20P56880 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN20P56880 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CLDN20P56880 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN20P56880 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CLDN20P56880 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 Z69720.1-201ENST00000601483 472 ntBASIC16.18■□□□□ 0.18
CLDN20P56880 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN20P56880 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLDN20P56880 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CLDN20P56880 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN20P56880 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN20P56880 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN20P56880 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN20P56880 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CLDN20P56880 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CLDN20P56880 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN20P56880 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLDN20P56880 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLDN20P56880 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 NKILA-202ENST00000614771 2598 ntBASIC16.17■□□□□ 0.18
CLDN20P56880 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN20P56880 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN20P56880 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLDN20P56880 KRT17P6-201ENST00000453795 1220 ntBASIC16.17■□□□□ 0.18
CLDN20P56880 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.17■□□□□ 0.18
CLDN20P56880 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.17■□□□□ 0.18
CLDN20P56880 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN20P56880 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms